9 Jul 2012 06:33
GSoC python variant update 7
Lenna Peterson <arklenna <at> gmail.com>
2012-07-09 04:33:57 GMT
2012-07-09 04:33:57 GMT
Post: http://arklenna.tumblr.com/post/26812132902/ Synopsis: This week, I wrote a script for PyVCF that can filter a file by sample as it's being parsed. It's currently named `vcf_sample_filter.py`. It's designed to be functional from the command line, the Python interpreter, or as a module. Next up: come up with a generic-via-extensibility representation of a variant. I'm working through some examples and should have a basic outline soon. Lenna
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