Re: promoters

Hello Aliza,

You've reached the mailing list for the software that powers the
genome browser on the Melonomics website (which is a new one to me--I
haven't heard of it before).  While you can use what we call relative
coordinates in GBrowse searches, which would look like this
"MELO3C012837P1:-3000..-1" and would get you the 3000 bases upstream
of that feature, it doesn't appear that it would do you any good in
this instance, since the owners of this GBrowse instance haven't made
the DNA sequences available.  I suggest you contact the owners listed
on the main page to ask for help.

Good luck,
Scott

On Wed, Aug 15, 2012 at 8:15 AM, aliza finkler <alizaf@...> wrote:
> Hi,
>
>
>
>  I have been using Melonomics browser, but could not find a way to get
> promoter sequences. For example- I need the promoter seq (-3000) of
>>MELO3C012837P1.
>
>
>
> I will appreciate your kind assistance.
>
>
>
>  Aliza Finkler
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
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> Aliza Finkler (Ph.D.)
>
> Plant Sciences Dept.,
>
> Tel Aviv University,
>
> Tel Aviv 69978
>
> Israel
>
>
>
> Tel:  972-3-6405901
>
> Fax: 972-3-6406816
>
> Mobile: 0544319578
>
>
>
>
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--

-- 
------------------------------------------------------------------------
Scott Cain, Ph. D.                                   scott at scottcain dot net
GMOD Coordinator (http://gmod.org/)                     216-392-3087
Ontario Institute for Cancer Research

------------------------------------------------------------------------------
Live Security Virtual Conference
Exclusive live event will cover all the ways today's security and 
threat landscape has changed and how IT managers can respond. Discussions 
will include endpoint security, mobile security and the latest in malware 
threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/